Image Handling

Your place to discuss general handling of images and the CZI file format

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Tiff to czi converter

Last post by CarlZeissMicroscopy3 « Tue Jan 11, 2022 6:21 pm
Replies: 2
by Nick Davis » Mon Jan 10, 2022 4:23 pm

2 Replies

417 Views

Last post by CarlZeissMicroscopy3
Tue Jan 11, 2022 6:21 pm
Analysis in batch mode can only process files in CZI format

Last post by CarlZeissMicroscopy3 « Tue Jan 11, 2022 6:17 pm
Replies: 3
by Nick Davis » Tue Jan 11, 2022 1:20 am

3 Replies

234 Views

Last post by CarlZeissMicroscopy3
Tue Jan 11, 2022 6:17 pm
Avoid pixel overlaps while extracting separate tile images

Last post by CarlZeissMicroscopy3 « Mon Jan 10, 2022 3:43 pm
Replies: 1
by Fredrik Olsson » Tue Dec 28, 2021 6:21 pm

1 Replies

371 Views

Last post by CarlZeissMicroscopy3
Mon Jan 10, 2022 3:43 pm
Streaming live feed to external software

Last post by CarlZeissMicroscopy3 « Fri Nov 12, 2021 11:39 am
Replies: 1
by Anthony Fouad » Thu Nov 11, 2021 8:30 pm

1 Replies

354 Views

Last post by CarlZeissMicroscopy3
Fri Nov 12, 2021 11:39 am
CZItoTIFFConverter

Last post by CarlZeissMicroscopy3 « Tue Apr 27, 2021 4:20 pm
Replies: 9
by user-6814 » Sun Apr 14, 2019 12:42 pm

9 Replies

5909 Views

Last post by CarlZeissMicroscopy3
Tue Apr 27, 2021 4:20 pm
DefaultUnitFormat in XML File do not seem correct

Last post by CarlZeissMicroscopy3 « Tue Mar 02, 2021 3:38 pm
Replies: 1
by Mike Jackson » Thu Feb 25, 2021 5:47 pm

1 Replies

597 Views

Last post by CarlZeissMicroscopy3
Tue Mar 02, 2021 3:38 pm
Saving multiple experiment blocks from OAD

Last post by CarlZeissMicroscopy3 « Tue Mar 02, 2021 12:03 pm
Replies: 1
by Xavier Snelgrove » Fri Feb 26, 2021 11:36 pm

1 Replies

548 Views

Last post by CarlZeissMicroscopy3
Tue Mar 02, 2021 12:03 pm
Get pixel coordinates from an image

Last post by CarlZeissMicroscopy3 « Wed Dec 09, 2020 12:41 pm
Replies: 1
by Raphael Schneider » Thu Nov 12, 2020 11:03 am

1 Replies

770 Views

Last post by CarlZeissMicroscopy3
Wed Dec 09, 2020 12:41 pm
How to swap order of 2 channels in CZI file?

Last post by CarlZeissMicroscopy3 « Tue Oct 20, 2020 11:22 am
Replies: 1
by Lug Maxwell » Tue Sep 01, 2020 11:49 pm

1 Replies

994 Views

Last post by CarlZeissMicroscopy3
Tue Oct 20, 2020 11:22 am
Sorting images using keywords

Last post by CarlZeissMicroscopy3 « Tue Oct 20, 2020 10:59 am
Replies: 1
by Mohammad Naser » Tue Sep 22, 2020 9:00 pm

1 Replies

913 Views

Last post by CarlZeissMicroscopy3
Tue Oct 20, 2020 10:59 am
Audit Trail Metadata

Last post by Dan Stevens « Tue Aug 18, 2020 7:25 am
Replies: 2
by Dan Stevens » Sat Aug 15, 2020 5:28 am

2 Replies

1027 Views

Last post by Dan Stevens
Tue Aug 18, 2020 7:25 am
Table-Chart features is gone in ZEN Lite 3.1?

Last post by user-6334 « Fri Feb 07, 2020 4:37 am

by user-6334 » Fri Feb 07, 2020 4:37 am

0 Replies

1061 Views

Last post by user-6334
Fri Feb 07, 2020 4:37 am
image dimensions (µm-pixel relation) from meta files

Last post by user-4 « Wed Jan 15, 2020 4:17 pm
Replies: 1
by user-7163 » Mon Dec 16, 2019 6:03 pm

1 Replies

3345 Views

Last post by user-4
Wed Jan 15, 2020 4:17 pm
Problems using czi image container

Last post by user-6033 « Mon Nov 11, 2019 12:29 pm
Replies: 5
by user-6033 » Mon Oct 28, 2019 9:31 am

5 Replies

3719 Views

Last post by user-6033
Mon Nov 11, 2019 12:29 pm
Reading compressed CZI on Linux/MacOS machines - Python czifile library.

Last post by user-6898 « Tue Sep 03, 2019 11:12 pm
Replies: 2
by user-6898 » Mon Sep 02, 2019 11:04 pm

2 Replies

2532 Views

Last post by user-6898
Tue Sep 03, 2019 11:12 pm
CZI to SUR (Topo)

Last post by user-6850 « Thu Aug 22, 2019 2:11 pm
Replies: 2
by user-6850 » Tue Aug 20, 2019 1:45 pm

2 Replies

2252 Views

Last post by user-6850
Thu Aug 22, 2019 2:11 pm
Why is the SubBlock-Count different from the size of the list of sub-blocks?

Last post by user-6898 « Wed Jul 31, 2019 5:34 pm
Replies: 2
by user-6898 » Tue Jul 02, 2019 3:18 pm

2 Replies

2644 Views

Last post by user-6898
Wed Jul 31, 2019 5:34 pm
Read Z coordinate from CZI file

Last post by user-4 « Wed Jul 24, 2019 9:41 am
Replies: 1
by user-6850 » Wed Jul 24, 2019 7:18 am

1 Replies

2527 Views

Last post by user-4
Wed Jul 24, 2019 9:41 am
export the stitching image to zen connect ?

Last post by user-6334 « Tue Jul 23, 2019 4:11 am
Replies: 3
by user-6334 » Fri Jul 05, 2019 6:24 am

3 Replies

3491 Views

Last post by user-6334
Tue Jul 23, 2019 4:11 am
How can I extract Acquisition Time metadata with msec accuracy?

Last post by user-4 « Wed Feb 06, 2019 1:58 pm
Replies: 3
by user-4073 » Fri Aug 22, 2014 1:24 am

3 Replies

7191 Views

Last post by user-4
Wed Feb 06, 2019 1:58 pm
Export TIF images from multiwell Tile with dedicated names

Last post by user-6244 « Sun Dec 09, 2018 9:11 pm
Replies: 7
by user-3571 » Tue Sep 10, 2013 8:03 am

7 Replies

12715 Views

Last post by user-6244
Sun Dec 09, 2018 9:11 pm
Beginner Macro Creation-navigating directory trees

Last post by user-6549 « Wed Nov 21, 2018 9:11 pm

by user-6549 » Wed Nov 21, 2018 9:11 pm

0 Replies

749 Views

Last post by user-6549
Wed Nov 21, 2018 9:11 pm
1 pixel size image reading one of the channels from czi file

Last post by user-4 « Wed Sep 05, 2018 4:19 pm
Replies: 1
by user-6352 » Sat Aug 04, 2018 7:47 am

1 Replies

3641 Views

Last post by user-4
Wed Sep 05, 2018 4:19 pm
Data Management

Last post by user-8 « Mon Mar 05, 2018 12:35 pm
Replies: 1
by user-6164 » Fri Mar 02, 2018 5:07 am

1 Replies

4470 Views

Last post by user-8
Mon Mar 05, 2018 12:35 pm
Accessing ZEN Archive

Last post by user-4 « Wed Feb 28, 2018 2:39 pm
Replies: 1
by user-5572 » Wed Feb 14, 2018 2:26 pm

1 Replies

3583 Views

Last post by user-4
Wed Feb 28, 2018 2:39 pm

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