Tiff to czi converter

Your place to discuss general handling of images and the CZI file format
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Nick Davis
Posts: 8
Joined: Mon Jan 10, 2022 4:16 pm

Tiff to czi converter

Post by Nick Davis »

Hello,

1) How do I batch convert hundreds of .tif images to .czi? I need to conduct batch image analysis, but in order to do that, they all need to be in .czi format. All I have are .tif images. I can use python.

2) From there using python, how would I feed that to the ZEN model for image analysis? (I have already created the model.)

Thank you,
Nick
Nick Davis
Posts: 8
Joined: Mon Jan 10, 2022 4:16 pm

Re: Tiff to czi converter

Post by Nick Davis »

Or is there a better way to handle batches of .tif images to perform batch analysis?
CarlZeissMicroscopy3
Posts: 180
Joined: Wed May 20, 2020 10:10 am

Re: Tiff to czi converter

Post by CarlZeissMicroscopy3 »

Hello Nick Davis,

a tif-image is loaded the same way as a czi file!

Code: Select all

zenImage = ZenImage()
PathAndFile = "C:\\MyPath\\MyImage.tif"
zenImage.Load(PathAndFile)
the resulting zenImage can be used as an imput image for analysis, just like a czi image!
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