I am looking for a way to bulk convert multiple .czi files to image files (.Tiff and .JPEG) within the labscope file tab. The option exists to send multiple images to a report but i can't find a way to convert multiple .czi image file. Is this currently possible in labscope?
Running v3.3.1
Labscope bulk file convert
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- Posts: 21
- Joined: Thu May 21, 2020 4:12 am
Re: Labscope bulk file convert
Hello,
Here are the steps:
For iOS, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> convert to JPG/TIF
For Windows, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> choose "save as" >> choose the desired image format JPG or TIF under "save as type"
Here are the steps:
For iOS, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> convert to JPG/TIF
For Windows, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> choose "save as" >> choose the desired image format JPG or TIF under "save as type"
Re: Labscope bulk file convert
Lester Zhang wrote: ↑Tue Mar 01, 2022 4:38 am Hello,
Here are the steps:
For iOS, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> convert to JPG/TIF
For Windows, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> choose "save as" >> choose the desired image format JPG or TIF under "save as type"
OvO Unblocked
Your steps are indeed correct, and I have succeeded.
Re: Labscope bulk file convert
Converting multiple .czi files to .Tiff and .JPEG formats in bulk is indeed possible, but it may not be a direct feature within the Labscope software. However, you can use external tools like ImageJ with the Bio-Formats plugin to convert .czi files to .Tiff. There's also a script available that can help with batch processing for such
https://dinogame.one