Labscope bulk file convert

Get help by our specialists and community members.
Post Reply
Bradley Staniforth
Posts: 1
Joined: Wed Jan 26, 2022 12:38 pm

Labscope bulk file convert

Post by Bradley Staniforth »

I am looking for a way to bulk convert multiple .czi files to image files (.Tiff and .JPEG) within the labscope file tab. The option exists to send multiple images to a report but i can't find a way to convert multiple .czi image file. Is this currently possible in labscope?

Running v3.3.1
Lester Zhang
Posts: 21
Joined: Thu May 21, 2020 4:12 am

Re: Labscope bulk file convert

Post by Lester Zhang »

Hello,

Here are the steps:
For iOS, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> convert to JPG/TIF
For Windows, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> choose "save as" >> choose the desired image format JPG or TIF under "save as type"
rosy dam
Posts: 6
Joined: Fri Aug 25, 2023 5:48 am
Contact:

Re: Labscope bulk file convert

Post by rosy dam »

Lester Zhang wrote: Tue Mar 01, 2022 4:38 am Hello,

Here are the steps:
For iOS, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> convert to JPG/TIF
For Windows, In files tag of Labscope >> select multiple czi files >> click on the "share" button >> choose "save as" >> choose the desired image format JPG or TIF under "save as type"
OvO Unblocked

Your steps are indeed correct, and I have succeeded.
tox xeso
Posts: 1
Joined: Mon Mar 25, 2024 8:36 am

Re: Labscope bulk file convert

Post by tox xeso »

Converting multiple .czi files to .Tiff and .JPEG formats in bulk is indeed possible, but it may not be a direct feature within the Labscope software. However, you can use external tools like ImageJ with the Bio-Formats plugin to convert .czi files to .Tiff. There's also a script available that can help with batch processing for such
Post Reply